Phenotype Diversity and Gene Myostatin (MSTN) of Bangkok Chicken using PCR-RFLP
Triana Mardiah(1), Depison Depison(2*), Helmi Ediyanto(3)
(1) Animal Science Universitas Jambi
(2) Animal Science Universitas Jambi
(3) Animal Science Universitas Jambi
(*) Corresponding Author
Abstract
This study aims to characterize the phenotype and determine the diversity of the Myostatin (MSTN) gene at Bangkok chickens using the Polymerase Chain Reaction- Restriction Fragment Length Polymorphism (PCR-RFLP) method. This study used 50 Bangkok chicken blood samples taken from the axillary vein on the wing. DNA was extracted using the protocol Genomic DNA Purification Kit from Promega and then amplified by PCR (polymerase chain reaction) using a pair of primers F: 5'GGT TTT GAC GAC ATG AGC CT3' R: 5'CAG GTG GAA TGT CAT GCA GA3' with product length 955 bp. Amplification products were cut using restriction enzyme MboI with cutting site ↓GATC. MSTN|MboI fragments of the Bangkok chicken were electrophoresed using 2% agarose gel and visualized using doc gel. The average difference test (T-test) on body weight and weight gain of Bangkok chickens from DOC to 3 months by gender. Polymorphism analysis includes allele frequency and genotype. Male and female Bangkok chickens have low phenotype diversity. The MSTN|MboI gene fragment is monomorphic with band positions of 492 bp, 244 bp, and 219 bp resulting in a genotype of ++, and there is one type of allele with a + allele frequency of 100%.
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Alfaruqi, H. Q. D., S. A. Wibowo, and A. Khumaira. 2020. Detection of red sea bream iridovirus (rsiv) using PCR technique on carp (Osphronemus goramy) fry at Kipm Station, Yogyakarta.
Bhattacharya, T., K., R. Shukla, R. N. Chatterjee, and K. Dushyanth. 2017. Knock down of the myostatin gene by RNA interference increased body weight in chicken. Journal of Biotechnology. 241: 61-68.
Batubara, A. 2017. Myostatin gene expression and its application on goat breeding program. WARTAZOA. 27: 089-094.
Djego, Y., J. N. Kihe, and H. T. Pangestuti. 2019. Efek komposisi genotip dari ayam ras petelur, kate dan lokal sabu terhadap sifat-sifat pada bobot badan dan ukuran tubuh. Jurnal Nukleus Peternakan 6: 20-25.
Fahrudin, A., W. Tanwiriah, and H. Indrijani. 2016. Konsumsi ransum, pertambahan bobot badan dan konversi ransum ayam lokal di jimmy’s farm cipanas kabupaten cianjur. Fakultas Peternakan, Universitas Padjadjaran.
Fastawa, R., C. Sumantri, A. Gunawan, and C. Murtini. 2019. Administration of anti-myostatin in broodstock and myostatin gene diversity and its association with Sentul chick carcass pieces (f1). Jurnal Ilmu Produksi dan Teknologi Hasil Peternakan 07: 22-28.
Hapsari, I. P. 2015. Ukuran tubuh dan produksi telur ayam hasil persilangan ayam lokal dengan ayam ras pedaging. Institut Pertanian Bogor, Bogor.
Hernandez, M. R., F. R. L. Buckle, E. Palacios, and B. S. Baron. 2006. Preferential jabehavior of white shrimp Litopenaeus vannamei (Boone 1931) by progressive temperature-salinity simultaneous interaction. J. Thermal Biology 31: 565-572.
Hidayati, E. Saleh, and T. Aulawi. 2016. Identification of the genetic diversity of bmpr-1b (bone morphogenetic protein receptor ib) in Arabic chickens, native chickens and laying hens using PCR-RFLP. Jurnal Peternakan 13: 1-12.
Irmaya, D., Depison, and Gusharianto. 2021. Quantitative Characteristic of Indonesia Native Chickens at the Age of 4 months. Livestock and Animal Research, 19: 108-119.
Jakaria, D., Duryadi, R. R. Noor, Tappa and H. Martojo. 2007. Correlation between polymorphism of mspi growth hormone gene with body weight and body size of West Sumatran coastal cattle sapi. J. Indon. Trop. Anim. Agric. 32: 33-40.
Junaedi and Nurcholis. 2017. Correlation between polymorphism of growth hormone gene mspi with body weight and body size of West Sumatran coastal cattle. Museums Journal of Animal Livestock Science 1: 10-15.
Kusuma, D. and N. S. Prijono. 2007. Keanekaragaman sumber daya hayati ayam lokal Indonesia : Manfaat dan Potensi. LIPI Press, Jakarta.
Malewa, A. D. 2019. Keragaman gen hormon pertumbuhan domba palu dengan metode pcr-rflp. Jurnal Agrisains. 20: 144-153.
Ma’ruf, A. 2004. Peran pengaturan waktu dan jumlah pemberian pakan terhadap sekresi growth hormon (GH) dan insulin-like growth factor I (IGF-I) dalam mempengaruhi sintesis lemak dan protein daging ayam pedaging. Disertasi. Universitas Airlangga, Surabaya.
Mariandayani, H. N., D. D. Solihin, S. Sulandari, and C. Sumantri. 2013. Keragaman fenotipik dan pendugaan jarak genetik pada ayam lokal dan ayam broiler menggunakan analisis morfologi. Jurnal Veteriner 14: 475-484.
Mendenhall, W. 1987. Introduction to Probability and Statistics. 7th edn. PWS Publishers. 20 Park Plaza. Boston, Massachusetts. The USA.
North, M. O. and D. D. Bell. 1990. Commercial Chicken Production Manual. Fourth Edition. Van Nostrand Rain Hold, New York.
Nei, M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York.
Nei, M. and S. Kumar. 2000. Molecular Evolution and Phylogenetics. Oxford University Press, New York.
Noor, R. R. 2008. Genetika ternak. Penebar Swadaya, Jakarta.
Nova, T. D., Yurnalis and A. K. Sari. 2016. Keragaman genetik gen hormon pertumbuhan (ghImboii) pada itik Sikumbang Janti menggunakan penciri pcrrflp. Jurnal Peternakan Indonesia. 18: 44-52.
Pagala, M. A., A. M. Tasse, and N. Ulupi. 2015. Association of cGH EcoRV Gene with Production in Tolaki Chicken. IJSBAR 24: 88-95.
Pagala, M. A., L. O. Nafiu, and S. Maharani. 2019. Keragaan ukuran dimensi tubuh hasil persilangan ayam petelur dan bangkok pada fase starter. Jurnal Ilmu dan Teknologi Peternakan Tropis 6: 251-258.
Putri, A. B. S. R. N., Gushairiyanto, and Depison. 2020. Bobot badan dan karakteristik morfometrik beberapa galur ayam lokal. Jurnal Ilmu dan Teknologi Peternakan Tropis. 7: 256-263.
Puteri, N. I., Gushairiyanto, and Depison. 2020. Growth patterns, body weight, and morphometric of kub chicken, Sentul chicken and Arab chicken. Buletin Peternakan 44: 67-72.
Qurniawan, A. 2016. Kualitas daging dan performa ayam broiler di kandang terbuka pada ketinggian tempat pemeliharaan yang berbeda di Kabupaten Takalar Sulawesi Selatan. Program Pascasarjana, Institut Pertanian Bogor, Bogor.
Rahayu, S., M. Bata, and W. Hadi. 2014. Substitusi konsentrat protein menggunakan tepung bulu ayam yang diolah secara fisiko-kimia dan fermentasi menggunakan Bacillus sp. Mts. Agripet 14: 31-36.
Rahmat, M., T. Saili, and R. Badaruddin. 2020. Karakteristik pertumbuhan dan mortalitas beberapa strain ayam lokal. JIPHO (Jurnal Ilmiah Peternakan Halu Oleo) 2: 208-214.
Risnajati, D. 2014. Pengaruh jumlah ayam per-induk buatan terhadap performan ayam strain Isa Brown periode starter. Jurnal Sains Peternakan 12: 10-14.
Soeparno. 1998. Ilmu dan Teknologi Daging. Gadjah Mada University Press, Yogyakarta
Subekti K. and F. Arlina. 2011. Karakteristik genetik eksternal ayam kampung di Kecamatan Sungai Pagu Kabupaten Solok Sellatan. Jurnal Ilmiah Ilmu-Ilmu Peternakan 14: 74-86.
Suryana. 2017. Pengembangan ayam kampung unggul Balitbangtan (kub) di Kalimantan Selatan. WARTAZOA. 27: 45-52.
Urfa, H. Indrijani, and W. Tanwiriah. 2017. Model Kurva Pertumbuhan Ayam Kampung Unggul Balitnak (KUB) Umur 0-12 Minggu. Jurnal Ilmu Ternak 17: 59-66.
Wijayanti, R. P. 2011. Pengaruh Suhu Kandangan Yang Berbeda Terhadap Performans Ayam Pedaging Periode Starter. Fakultas Peternakan, universitas Brawijaya. Malang.
Yurnalis, Sarbaini, Arnim, Jamsari and W. Nellen. 2013. Identification of single nucleotide polymorphism of growth hormone gene Exon 4 and Intron 4 in Pesisir Cattle, local cattle breeds in West Sumatera Province of Indonesia. African Journal of Biotechnology. 12: 249-252.
Zhang, G., G. Dai, J. Wang, Y. Wei, F. Ding, L. Zhang, X. Zhao, K. Xie, and W. Wang. 2012. polymorphisms in the 5'-upstream region of the myostatin gene in four chicken breeds and their relationship with growth traits in the bian chicken. Afr. J. Biotech. 11: 9677-9682.
DOI: https://doi.org/10.21059/buletinpeternak.v45i4.68968
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