A Scientometric and Bibliometric Analysis for Actinomycetes Research - Current Status and Future Trends

https://doi.org/10.22146/jpti.77558

Syahri Syahri(1*), Renny Utami Somantri(2)

(1) Research Center for Food Crop, National Research and Innovation Agency (BRIN) Cibinong Science Center, Jln. Raya Jakarta-Bogor, Km. 46, Bogor 16911 Indonesia
(2) Research Center for Agroindustry, National Research and Innovation Agency (BRIN), KST BJ Habibie, Serpong 15311 Indonesia
(*) Corresponding Author

Abstract


Actinomycetes are Gram-positive filamentous bacteria used as biocontrol agents against pathogens. Currently, little research on actinomycetes has been published in Indonesia. The study provides issues related to the most relevant keywords in actinomycetes, the most productive authors and countries on actinomycetes research, current research on actinomycetes, and future topics in actinomycetes research. This paper aims to understand the current status and trend of research on actinomycetes in biological control, especially their acts as biocontrol agents. We used VOSviewer and CiteSpace software to perform a scientometric and bibliometric analysis. Out of 452 Scopus publications published between 1971 and 2022. Research on actinomycetes has increased rapidly since 2000, leading to an exponential trend. The result shows that >50% of papers focus on Agricultural and Biological Sciences and indicate that actinomycetes are mainly applied as biocontrol agents. China is the most documented and powerful country, followed by the United States and Iran. In contrast, Indonesia ranks 19th in the world with nine published papers. Scientometric analysis shows Shahidi Bonjar nominated as the strongest citation burst author (4.01). Their topic is mainly on the biological control of pathogens by Actinomycetes, especially Streptomyces sp., while fungi are a dominant pathogen. These findings are related to bibliometric analysis, showing Streptomyces spp. and fungi are two primary keywords in the Scopus database, found on 183 and 139 documents. We found actinomycete research focuses on their ability to manage plant diseases naturally. In the future, we predict actinobacterial research is still essential to biological control, particularly those involving Streptomyces species. Also, several important topics are associated with their activities in controlling pests (nematode), postharvest disease, and growth promoter ability.


Keywords


bibliometric; biological control; CiteSpace; scientometric; Streptomyces

Full Text:

PDF


References

Ahmad, G., Khan A., Khan A.A., Ali A., & Mohhamad, H.I. (2021). Biological Control: A Novel Strategy for the Control of the Plant Parasitic Nematodes. International Journal of General and Molecular Microbiology, 114(7), 885–912. https://doi.org/10.1007/s10482-021-01577-9

Barreto, T.R., da Silva A.C.M., Soares A.C.F., & de Souza J.T. (2008). Population Densities and Genetic Diversity of Actinomycetes Associated to the Rhizosphere of Theobroma cacao. Brazilian Journal of Microbiology, 39(3), 464–470. https://doi.org/10.1590/S1517-83822008000300010

Bhatti, A.A., Haq S., & Bhat R.A. (2017). Actinomycetes Benefaction Role in Soil and Plant Health. Microbial Pathogenesis, 111, 458–467. https://doi.org/10.1016/j.micpath.2017.09.036

Broadbent, P., Baker K.F., & Waterworth Y. (1971). Bacteria and Actinomycetes Antogonistic to Fungal Root Pathogens in Australian Soils. Australian Journal of Biological Sciences, 24(4), 925–944. https://doi.org/10.1071/BI9710925

Castillo, U.F., Strobel, G.A., Ford, E.J., Hess, W.M., Porter, H., Jensen, J.B., Albert, H., Robison, R., Condron, M.A.M., Teplow, D.B., Stevens, D., & Yaver, D. (2002). Munumbicins, Wide-Spectrum Antibiotics Produced by Streptomyces NRRL 30562, Endophytic on Kennedia nigriscans. Microbiology, 148(9), 2675–2685. https://doi.org/10.1099/00221287-148-9-2675

Chaiharn, M., Sujada, N., Pathom-Aree, W., & Lumyong, S. (2018). The Antagonistic Activity of Bioactive Compound Producing Streptomyces of Fusarium Wilt Disease and Sheath Blight Disease in Rice. Chiang Mai Journal of Science, 45(4), 1680–1698.

Chen, C., & Song, M. (2019). Visualizing a Field of Research: A Methodology of Systematic Scientometric Reviews. PLoS ONE, 14(10), e0223994. https://doi.org/10.1371/journal.pone.0223994

Chen, C. (2017). Science Mapping: A Systematic Review of the Literature. Journal of Data and Information Science, 2(2), 1–40. https://doi.org/10.1515/jdis-2017-0006

Costa, F.G., Zucchi T.D., & de Melo I.S. (2013). Biological Control of Phytopathogenic Fungi by Endophytic Actinomycetes Isolated from Maize (Zea mays L.). Brazilian Archives of Biology and Technology, 56(6), 948–955. https://doi.org/10.1590/S1516-89132013000600009

Dang, Q., Luo Z., Ouyang C., & Wang L. (2021). First Systematic Review on Health Communication Using the Citespace Software in China: Exploring Its Research Hotspots and Frontiers. International Journal of Environmental Research and Public Health, 18(24), 13008. https://doi.org/10.3390/ijerph182413008

de Oliveira, M.F., da Silva, M.G., & van der Sand, S.T. (2010). Anti-Phytopathogen Potential of Endophytic Actinobacteria Isolated from Tomato Plants (Lycopersicon esculentum) in Southern Brazil, and Characterization of Streptomyces sp. R18(6), a Potential Biocontrol Agent. Research in Microbiology, 161(7), 565–572. https://doi.org/10.1016/j.resmic.2010.05.008

Díaz-Díaz, M., Bernal-Cabrera A., Trapero A., Medina-Marrero R., Sifontes-Rodríguez S., Cupull-Santana R.D., García-Bernal M., & Agustí-Brisach C. (2022). Characterization of Actinobacterial Strains as Potential Biocontrol Agents against Macrophomina phaseolina and Rhizoctonia solani, the Main Soil-Borne Pathogens of Phaseolus vulgaris in Cuba. Plants, 11(5), 645. https://doi.org/10.3390/plants11050645

Djebaili, R., Pellegrini M., Ercole C., Farda B., Kitouni M., & Del Gallo M. (2021). Biocontrol of Soil-Borne Pathogens of Solanum lycopersicum L. and Daucus carota L. by Plant Growth-Promoting Actinomycetes: In Vitro and In Planta Antagonistic Activity. Pathogens, 10(10), 1305. https://doi.org/10.3390/pathogens10101305

Duan, Y., Zhou, Y., Li, Z., Chen, X., Yin, C., & Mao, Z. (2022). Effects of Bacillus amyloliquefaciens QSB-6 on the Growth of Replanted Apple Trees and the Soil Microbial Environment. Horticulturae, 8(1), 83. https://doi.org/10.3390/horticulturae8010083

El-Tarabily, K.A., Soliman M.H., Nassar A.H., Al-Hassani H.A., Sivasithamparam K., McKenna F., & Hardy, G.E.St.J. (2000). Biological Control of Sclerotinia Minor Using a Chitinolytic Bacterium and Actinomycetes. Plant Pathology, 49(5), 573–583. https://doi.org/10.1046/j.1365-3059.2000.00494.x

El-Tarabily, K.A., & Sivasithamparam, K. (2006). Non-streptomycete Actinomycetes as Biocontrol Agents of Soil-borne Fungal Plant Pathogens and as Plant Growth Promoters. Soil Biology & Biochemistry, 38, 1505–1520. https://doi:10.1016/j.soilbio.2005.12.017

Ghaleb, H., Alhajiah H.H., Abdullah, A.A.B., Kassem, M.A., & Al-Sharafi, M.A. (2022). A Scientometric Analysis and Systematic Literature Review for Construction Project Complexuty. Buildings, 12(4), 482. https://doi.org/10.3390/buildings12040482

Gopalakrishnan, S., Pande, S., Sharma, M., Humayun, P., Kiran, B.K., Sandeep, D., Vidya, M.S., Deepthi, K., & Rupela, O. (2011). Evaluation of Actinomycete Isolates Obtained from Herbal Vermicompost for the Biological Control of Fusarium Wilt of Chickpea. Crop Protection, 30(8), 1070–1078. https://doi.org/10.1016/j.cropro.2011.03.006

Goudjal, Y., Toumatia, O., Yekkour, A., Sabaou, N., Mathieu, F., & Zitouni, A. (2014). Biocontrol of Rhizoctonia solani Damping-off and Promotion of Tomato Plant Growth by Endophytic Actinomycetes Isolated from Native Plants of Algerian Sahara. Microbiological Research, 169(1), 59–65. https://doi.org/10.1016/j.micres.2013.06.014

Hamidah, I., Sriyono, & Hudha, M.H. (2020). A Bibliometric Analysis of COVID-19 Research Using VOSviewer. Indonesian Journal of Science and Technology, 5(2), 209–216. https://doi.org/10.17509/ijost.v5i2.24522

Hassan, N., Nakasuji, S., Elsharkawy, M.M., Naznin, H.A., Kubota, M., Ketta, H., & Shimizu, M. (2017). Biocontrol Potential of an Endophytic Streptomyces sp. Strain MBCN152-1 against Alternaria brassicicola on Cabbage Plug Seedlings. Microbes and Environments, 32(2), 133–141. https://doi.org/10.1264/jsme2.ME17014

Hu, Z., Guo, F., & Hou, H. (2017). Mapping Research Spotlights for Different Regions in China. Scientometrics, 110(2), 779–790. https://doi.org/10.1007/s11192-016-2175-z

Jaber, M.A, & Fayyadh, M.A. (2019). Biological Control of Charcoal Rot Disease Caused by Macrophomina phaseolina (Tassi) Goid on Cowpea and Mung Bean by Some Isolates of Streptomyces spp. Basrah Journal of Agricultural Sciences, 32, 207–219. https://doi.org/10.37077/25200860.2019.269

Jacob, S., & Sudini, H.K. (2016). Indirect Plant Growth Promotion in Grain Legumes: Role of Actinobacteria. In G. Subramaniam, S. Arumugam, & V. Rajendran (Eds.), Plant Growth Promoting Actinobacteria: A New Avenue for Enhancing the Productivity and Soil Fertility of Grain Legumes (pp. 17–32). Springer Singapore. https://doi.org/10.1007/978-981-10-0707-1_2

Jacob, S., Sajjalaguddam, R.R., Kumar, K.V.K., Varshney, R., & Sudini, H.K. (2016). Assessing the Prospects of Streptomyces sp. RP1A-12 in Managing Groundnut Stem Rot Disease Caused by Sclerotium rolfsii Sacc. Journal of General Plant Pathology, 82(2), 96–104. https://doi.org/10.1007/s10327-016-0644-0

Lahmyed, H., Bouharroud, R., Qessaoui, R., Ajerrar, A., Amarraque, A., Aboulhassan, M.A., & Chebli, B. (2021). Actinomycete as Biocontrol Agents against Tomato Gray Mold Disease Caused by Botrytis cinerea. Kuwait Journal of Science, 48(3), 1–8. https://doi.org/10.48129/kjs.v48i3.9200

Li, X., Jing, T., Zhou, D., Zhang, M., Qi, D., Zang, X., Zhao, Y., Li, K., Tang, W., Chen, Y., Qi, C., Wang, W., & Xie, J. (2021). Biocontrol Efficacy and Possible Mechanism of Streptomyces sp. H4 against Postharvest Anthracnose Caused by Colletotrichum fragariae on Strawberry Fruit. Postharvest Biology and Technology 175, 111401. https://doi.org/10.1016/j.postharvbio.2020.111401

Loliama, B., Morinagab, T., & Chaiyanana, S. (2013). Biocontrol of Pythium aphanidermatum by the Cellulolytic Actinomycetes Streptomyces rubrolavendulae S4. ScienceAsia, 39 (6), 584–590. https://doi.org/10.2306/scienceasia1513-1874.2013.39.584

Mesdaghinia, A., Mahvi, A.H., Nasseri, S., Nodehi, R.N., & Hadi, M. (2015). A Bibliometric Analysis on the Solid Waste-Related Research from 1982 to 2013 in Iran. International Journal of Recycling of Organic Waste in Agriculture, 4(3), 185–195. https://doi.org/10.1007/s40093-015-0098-y

Muñoz-Écija, T., Vargas-Quesada, B., & Chinchilla-Rodríguez, Z. (2017). Identification and Visualization of the Intellectual Structure and the Main Research Lines in Nanoscience and Nanotechnology at the Worldwide Level. Journal of Nanoparticle Research, 19(2), 62. https://doi.org/10.1007/s11051-016-3732-3

Pasko, O., Chen, F., Oriekhova, A., Brychko, A., & Shalyhina, I. (2021). Mapping the Literature on Sustainability Reporting: A Bibliometric Analysis Grounded in Scopus and Web of Science Core Collection. European Journal of Sustainable Development, 10(1), 303–322. https://doi.org/10.14207/ejsd.2021.v10n1p303

Perianes-Rodriguez, A., Waltman, L., & van Eck, N.J. (2016). Constructing Bibliometric Networks: A Comparison between Full and Fractional Counting. Journal of Informetrics, 10(4), 1178–1195. https://doi.org/10.1016/j.joi.2016.10.006

Qiu, R., Hou, S., & Meng, Z. (2019). Artificial Intelligence and Business Management: A Scientometric Analysis Using CiteSpace. In Proceedings of the 19th International Conference on Electronic Business (pp. 69–76), Newcastle upon Tyne, UK: ICEB. December 8–12, 2019.

Shahidi Bonjar, G.H, Farrokhi, P.R., Bafti, S., Aghighi, S., Mahdavi, M.J., & Aghelizadeh, A. (2006). Laboratory Preparation of a New Antifungal Agent from Streptomyces olivaceus in Control of Fusarium oxysporum f.sp. melonis of Cucurbits in Greenhouse. Journal of Applied Sciences, 6(3), 607–610. https://doi.org/10.3923/jas.2006.607.610

Shahidi Bonjar, G.H., & Aghighi S. (2005). Chitinolytic and Microsclerostatic Activity of Iranian Strains of Streptomyces plicatus and Frankia sp. on Olive Isolate of Verticillium dahliae. Biotechnology, 4(2), 108–113. https://doi.org/10.3923/biotech.2005.108.113

Shahidi Bonjar, G.H., Zamanian, S., Aghighi, S., Farrokhi, P.R., Mahdavi, M.J., & Saadoun, I. (2006). Antibacterial Activity of Iranian Streptomyces coralus Strain 63 against Ralstonia solanacearum.” Journal of Biological Sciences, 6(1), 127–129. https://doi.org/10.3923/jbs.2006.127.129

Tedsree, N. & Tanasupawat, S. (2021). Streptomyces: Distribution, Biocontrol and Plant Growth Promoting Activity. In T. Barton & D. Ortiz (Eds.), The Encyclopedia of Bacteriology Research Developments (Vol. 4, pp. 991–1015). New York, United States: Nova Science Publishers, Inc.

Torres-Rodriguez, J.A., Reyes-Pérez, J.J., Castellanos, T., Angulo, C., Quiñones-Aguilar, E.E., & Hernandez-Montiel, L.G. (2022). Identification and Morphological Characterization of Marine Actinomycetes as Biocontrol Agents of Fusarium solani in Tomato. Revista de La Facultad de Agronomia, 39(1), e223915. https://doi.org/10.47280/RevFacAgron(LUZ).v39.n1.15

Toumatia, O., Yekkour, A., Goudjal, Y., Riba, A., Coppel, Y., Mathieu, F., Sabaou, N., & Zitouni, A. (2015). Antifungal Properties of an Actinomycin D-Producing Strain, Streptomyces sp. IA1, Isolated from a Saharan Soil. Journal of Basic Microbiology, 55 (2), 221–228. https://doi.org/10.1002/jobm.201400202

van Eck, N.J., & Waltman L. (2014). Visualizing Bibliometric Networks. In Y. Ding, R. Rousseau, & D. Wolfram (Eds.), Measuring Scholarly Impact (pp. 285–320). Cham, Switzerland: Springer. https://doi.org/10.1007/978-3-319-10377-8_13

van Eck, N.J., & Waltman L. (2010). Software Survey: VOSviewer, a Computer Program for Bibliometric Mapping. Scientometrics, 84(2), 523–538. https://doi.org/10.1007/s11192-009-0146-3

van Eck, N.J., & Waltman L. (2011). Text Mining and Visualization using VOSviewer. ISSI Newsletter, 7(3), 50-54.

Viana, J., Santos, J.V., Neiva, R.M., Souza, J., Duarte, L., Teodoro, A.C., & Freitas, A. (2017). Remote Sensing in Human Health: A 10-Year Bibliometric Analysis. Remote Sensing, 9(12), 1225. https://doi.org/10.3390/rs9121225

Wu, L., Danko, Y., Chen, F., Yao, X., & Zhang, F. (2022). Mapping the Literature of Integrated Marketing Communications: A Scientometric Analysis Using Citespace. Innovative Marketing, 18(1), 152–167. https://doi.org/10.21511/im.18(1).2022.13

Yuan, W.M., & Crawford, D.L. (1995). Characterization of Streptomyces lydicus WYEC108 as a Potential Biocontrol Agent against Fungal Root and Seed Rots. Applied and Environmental Microbiology, 61(8), 3119–3128. https://doi.org/10.1128/aem.61.8.3119-3128.1995

Zhai, X, Cui, J., Shao, J., Wang, Q., Chen, X., Wei, X., Zhou, X., Chen, Z., Bai, Y., & Li, M. (2017). Global Research Trends in Spinal Ultrasound: A Systematic Bibliometric Analysis. BMJ Open, 7(10), e015317. https://doi.org/10.1136/bmjopen-2016-015317

Zhang, X., Tong, J., Dong, M., Akhtar, K., & He, B. (2022). Isolation, Identification and Characterization of Nitrogen Fixing Endophytic Bacteria and Their Effects on Cassava Production. PeerJ, 10, e12677. https://doi.org/10.7717/peerj.12677

Zulfa, N.V., Fitroh, M., Santoso, I., Maryanto, A.E., & Yasman. (2021). Antagonistic Potential of Streptomyces Cellulosae SM12 against Ganoderma sp. TB3 and Ganoderma sp. TB4. Journal of Physics: Conference Series, 1725(1), 012055. https://doi.org/10.1088/1742-6596/1725/1/012055



DOI: https://doi.org/10.22146/jpti.77558

Article Metrics

Abstract views : 2198 | views : 1445

Refbacks

  • There are currently no refbacks.


Bookmark and Share


Copyright (c) 2022 Jurnal Perlindungan Tanaman Indonesia

Creative Commons License
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.

Jurnal Perlindungan Tanaman Indonesia ISSN 1410-1637 (print), ISSN 2548-4788 (online) is published by the Department of Plant Protection, Faculty of Agriculture, Universitas Gadjah Mada, in collaboration with Indonesian Entomological Society (Perhimpunan Entomologi Indonesia, PEI) and Indonesian Phytopathological Society (Perhimpunan Fitopatologi Indonesia, PFI). The content of this website is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.  

View website statistics